Correct me if I'm wrong, but I do not think these shocks have a clear coat. It is more likely that they are clear anodized.
If any of you have looked at your rear diff cover or axles and seen rust forming, you can see what kind of sand blasting the underside gets (even just on the streets).
If the shocks were painted, the same thing would be happening to them. The pattern of the shocks suggests to me it's something else. Anodization has a much higher tolerance for wear than paint, but it is still susceptible to cracking from thermal stress.
These shocks get pretty dang warm when they are working, so this is my guess. Heat developed, cracked the anodized finish and nature took care of the rest.
Chrome plating (trivalent, which is probably what they would use. Not hexavalent) would not be much better than anodizing. Hexavalent plating would be awesome, but is expensive because it is highly regulated and toxic to produce.
Basically... nothing can stop this. But, preventative maintenance should help, such as AMSOIL. Here's an article about removing surface oxidation from aluminum:
How to Restore Oxidized Aluminum Finish | eHow.com