Well on the way home from work today I was in manual driving spiritedly shifting gear and when upshifting my transmission paused for a 1/2 second and then shifted. It did this a few times sometimes the pause felt a little longer. At 29,007 miles now.
So I called the Service Advisor and they state right now they're backlogged on transmission work for about two weeks. He asked if I had and lights or trouble codes showing which I don't and stated to drive it for a few more days to see if it continues. He also mentioned about disconnecting the battery cables so the transmission can relearn.
If I end up taking it back in it will be the third time for transmission related issues even though I'm not sure if the second time counts because it was supposedly just overfilled a little.
Both time it acted up I did notice my transmission temperature was warmer than usual around 221° but I don't really think that plays a part in this acting up.
Anyway I did some research and came across this video below and will post a few comments that basically states that the adaptive shifting strategy can be disabled and has helped a few people.
I just want my Ford Raptor to shift properly because I've always owned Ford trucks and never had any real issues. I love this truck.