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I have 88k on my '12 and the only thing I absolutely hate about it is the excessive wind noise on the driver side front door. I can't get rid of it.
The rear sliding glass squeaked like crazy, but white lithium grease on the tracks fixed that up.
Just an idea, there is a foam 'buffer' piece that fits inside the front fenders between the fender and the front frame. See them every time I take stock fenders off. It's not glued in place and I think, like most foam, it shrinks a little from time and heat. If that had fallen down or turned sideways, it might be adding to the wind noise you are hearing. Pop your fender out and see if that has moved. If you're real careful, you won't need to cut the adhesive that Ford applied to the inside of the fender near the door jamb.....
Sounds like an afternoon project. Off to google I go.
Thanks for the suggestion.
Gen 1 owners: how reliable is your Raptor? I know it won't have much bearing on Gen 2, especially in the first model year, but I am curious how well a Raptor rates in reliability and build quality compared to a normal F-150. Are they solidly built or can I expect squeaks and rattles and other issues? Thanks.